PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR83249.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 653aa MW: 71029.3 Da PI: 5.96

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR83249.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.8	7.9e-32	272	329	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk++ers+ d++++e++Y+g+H+h+k RWR83249.1 272 EDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCQVKKQLERSH-DGHITEVVYKGSHDHPK 329 7**************************************.*************85 PP
2	WRKY	107.1	8.8e-34	451	509	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ RWR83249.1 451 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 509 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 653 aa Download sequence
MEEDSTSDLQ NSREQDPDSD SSPSELRFEV FHGGNAVLKG ENGRREKSGL GALQTAGSNA 60 ARYKSMSPAS LPISRSPCLT IPPGLSPTSL LESPVMLLDL KAEPSPTTGS FSMPLARHVS 120 INADSASLPR DTTNNSTCDE RSSGEFEFKP HTNAGSGSII SSSGHLVSVG SNYHQSNPFV 180 PFQGQYESQK FVSSSSITME SIKVPSDEFT LPVPASVPPV YTVTSSAIAS AEVADVEPRQ 240 RQGSDSGNLL MYSDNTDSKE SKSLVVADKS SEDGYNWRKY GQKHVKGSEF PRSYYKCTHP 300 NCQVKKQLER SHDGHITEVV YKGSHDHPKP LPGRRSTVGA VLSSQTEELC DGFSSLISAE 360 DKSLNAHGHQ AHQIEPINNF ELSPVSASED DIEVVGARSN RNDDDVDDDD DDDPESKRRK 420 IDIGGTDVIP LIKATREPRV VVQTLSEVDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTNA 480 GCPVRKHVER ASHDPKAVIT TYEGKHNHDV PIGRTSSHDA TGPMIRNDAI APNRHVSPAL 540 NSIRNDDTTK AMMPYCSDRS DGGVVSLDLG VGFSLSPENR SNELQQMPDT QAHGQIEIAG 600 SGCSKLIQAT PVPTYYGRLL KEGVDCYGPR ETPPSNHPTD RSRQNIGRLV MGP

Sequence ? help Back to Top

Protein Sequence Length: 653 aa Download sequence

MEEDSTSDLQ NSREQDPDSD SSPSELRFEV FHGGNAVLKG ENGRREKSGL GALQTAGSNA  60
ARYKSMSPAS LPISRSPCLT IPPGLSPTSL LESPVMLLDL KAEPSPTTGS FSMPLARHVS  120
INADSASLPR DTTNNSTCDE RSSGEFEFKP HTNAGSGSII SSSGHLVSVG SNYHQSNPFV  180
PFQGQYESQK FVSSSSITME SIKVPSDEFT LPVPASVPPV YTVTSSAIAS AEVADVEPRQ  240
RQGSDSGNLL MYSDNTDSKE SKSLVVADKS SEDGYNWRKY GQKHVKGSEF PRSYYKCTHP  300
NCQVKKQLER SHDGHITEVV YKGSHDHPKP LPGRRSTVGA VLSSQTEELC DGFSSLISAE  360
DKSLNAHGHQ AHQIEPINNF ELSPVSASED DIEVVGARSN RNDDDVDDDD DDDPESKRRK  420
IDIGGTDVIP LIKATREPRV VVQTLSEVDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTNA  480
GCPVRKHVER ASHDPKAVIT TYEGKHNHDV PIGRTSSHDA TGPMIRNDAI APNRHVSPAL  540
NSIRNDDTTK AMMPYCSDRS DGGVVSLDLG VGFSLSPENR SNELQQMPDT QAHGQIEIAG  600
SGCSKLIQAT PVPTYYGRLL KEGVDCYGPR ETPPSNHPTD RSRQNIGRLV MGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-135	WRKY family protein