PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR82981.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 250aa MW: 28170.9 Da PI: 10.954 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 63.2 | 5.2e-20 | 21 | 66 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgrW t+Ede+l +avk++G ++W+ I +++ gR++k+c++rwq+ RWR82981.1 21 RGRWRTDEDEKLRRAVKEHGAKNWSVICTYIP-GRSAKSCRLRWQNQ 66 89******************************.************96 PP | |||||||
2 | Myb_DNA-binding | 40.2 | 8e-13 | 74 | 116 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++T eEd+ +v+ +lG++ W++Iar ++ gRt++ +k++w+ RWR82981.1 74 SPFTLEEDLEIVRHQSRLGNK-WAAIARVLNAGRTENAVKNHWN 116 589******************.*********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MATSQAMTIA TGSASAIEEV RGRWRTDEDE KLRRAVKEHG AKNWSVICTY IPGRSAKSCR 60 LRWQNQLSPD VNHSPFTLEE DLEIVRHQSR LGNKWAAIAR VLNAGRTENA VKNHWNCRIR 120 KMMSSYSPPY DRRRAYHRYG YRRYHPLPLP SPLVLRSLSR RVISYGSSHP SNGGGEPHGS 180 IDLTLRLAPP GPGLRSSSLP STREMVSFVV KKEARGYFLE LRGNLQTGSN NASEGVMNRM 240 ENQAGVGRMN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50060.1 | 7e-41 | MYB family protein |