PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR82957.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 261aa MW: 28817.2 Da PI: 8.6146 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.7 | 1.4e-29 | 96 | 155 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK k+++ pr+Y++C+++ +Cpvkkkv+rsa d++++++tYegeH h RWR82957.1 96 VKDGYQWRKYGQKITKDNPSPRAYFKCSTSsDCPVKKKVQRSAGDKSILVVTYEGEHAHA 155 58*************************9988***************************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 261 aa Download sequence |
MSTQQDISDK DKVQALEAQI ERLHKENEEL KNMIGVMTNN YHNLQAHTNS FLTHEVGRPS 60 ESWSSQDSSK KQMKGTLKAK TTQVLVRIDA EGSLIVKDGY QWRKYGQKIT KDNPSPRAYF 120 KCSTSSDCPV KKKVQRSAGD KSILVVTYEG EHAHALCDDP NGSTSRTHGT IIGSVLPGLP 180 CSVPLNPSQS SASLDLTLSR PDGATNRPPQ NNNHHLHQHN NSNTNFLVEY VASLMRDPNF 240 TTALAAEVAQ SIIGSHDQTK K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G80840.1 | 2e-38 | WRKY family protein |