PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR82307.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 256aa MW: 29192.7 Da PI: 5.455 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 142 | 3.5e-44 | 6 | 135 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 lppG+rF Pt+eelv +yL+ k++ +++el++vi+ vdiy+++Pw+Lp+ ++ ++++w+fFs+r++++a+g r+nr+t sgyWkatg v+s++ RWR82307.1 6 LPPGYRFFPTEEELVGFYLRSKLDMRRVELDHVIPVVDIYSLDPWELPRksgELCIGDEQWFFFSPRQEREANGGRPNRITPSGYWKATGIPGYVFSSD 104 79****************************999***************52454444999**************************************** PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyr 127 ++++glk+t+vfy+g+ap+g+kt+W ++ey+ RWR82307.1 105 NRTIGLKRTMVFYQGKAPTGTKTKWKVNEYK 135 ******************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MSNPNLPPGY RFFPTEEELV GFYLRSKLDM RRVELDHVIP VVDIYSLDPW ELPRKSGELC 60 IGDEQWFFFS PRQEREANGG RPNRITPSGY WKATGIPGYV FSSDNRTIGL KRTMVFYQGK 120 APTGTKTKWK VNEYKAIEEA TTSAASLKVR HEVNLCRVYV TSGNLRSFDR RPLVAAPREM 180 LDRADDRREA MPNVDSCNNI EDASCRNFGE SAHGNNPSME EHTGFLYSSL KEETSNDLNM 240 INDMDALWNS IVGADY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 1e-71 | NAC family protein |