PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR82268.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 423aa    MW: 44868.3 Da    PI: 6.1799
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR82268.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.1e-20209258255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa a+++a+++++g
  RWR82268.1 209 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAAMAYDEAALRFRG 258
                 7********.**********7.....337*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    
MCIKVANRRE SADFVRFPTG ADGEEEDDTA TRMTAPATTA MTTMPEVMFP GYSRTREMST  60
MVRALTHVVS GERGSTMTAG GEWVSSGMVA GGGSAATGVG SAASPPPSSF SSSSWGGGGG  120
GGGSSSSSGQ KRAREEEASQ VPHESLLRYY RGGFGDVQMY QGGPSAEAAV AQEGPSILTT  180
SSAAATVATP ATNVEESSSS YGGEERRRRY RGVRQRPWGK WAAEIRDPHK AARVWLGTFD  240
TAEAAAMAYD EAALRFRGNR AKLNFPENVR IQQPMPFSQA THLPVPAPPA APLPAPGIPQ  300
QFLQSQAPQQ IQNPDILRDY RQYSQLLQST IDFQRHHPTN LLDQFLLSSS SSSSSSSSSS  360
SSSSSFASSS STSFPLLYPG ATTMEQQMGY YFGPPGDRDP AAGSDTLLPP WTDSSHYPPS  420
SSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1205210ERRRRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.14e-23ERF family protein