PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR82001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | bHLH | ||||||||
Protein Properties | Length: 177aa MW: 19713.8 Da PI: 10.1049 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.8 | 1.4e-11 | 13 | 61 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 + +Er+RR ++++ ++L +l P+ +sk+ +s + Le+A YI++Lq RWR82001.1 13 RKTVERNRRMNMKDLCSKLASLTPSH---RSKRaPSVLDQLEQAAAYIRELQ 61 5789*********************9...89999*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MKSSKSSLSK IERKTVERNR RMNMKDLCSK LASLTPSHRS KRAPSVLDQL EQAAAYIREL 60 QENIKALKEK RALAAYIVGI NKDITDGMTV ELRTPVIELR ESGSAVEVVL ITGLNKNFML 120 SDVISIIEEE GAQVVNVNLS CAANKVFHTI HSQVTSARVG FESVRVYERL KELVKGT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 9e-30 | bHLH family protein |