PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR81990.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 210aa MW: 23761.1 Da PI: 8.2854 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.8 | 4.5e-19 | 58 | 112 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq + Lee F++n++++ +++e LA +l+L+ rqV vWFqNrRa+ k RWR81990.1 58 RKKLRLTKEQSRLLEESFRENQTLTPKQKETLALELKLKPRQVEVWFQNRRARTK 112 78889************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 119.5 | 1.7e-38 | 58 | 146 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq++lLEesF+e+++L+p++K++la eL+l+prqv+vWFqnrRARtk+kq+E+++e+Lkr++ +l+een+rL++eveeLr+ RWR81990.1 58 RKKLRLTKEQSRLLEESFRENQTLTPKQKETLALELKLKPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLREENRRLQREVEELRA 146 69*************************************************************************************94 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MEIIPSSSSS LDLTMAPPAS DGVCCMRDLD INQVPSSGME SWANRGIEEE DDNGGPPRKK 60 LRLTKEQSRL LEESFRENQT LTPKQKETLA LELKLKPRQV EVWFQNRRAR TKLKQTEMEC 120 EYLKRCFGSL REENRRLQRE VEELRAMRVA PPTVLSPHTC EPLPASTLSM CPRCERVTTT 180 TTTTITNKKG KVGPTYHSSE SHLSAAAAAW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 107 | 115 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01430.1 | 2e-67 | HD-ZIP family protein |