PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR81887.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 430aa MW: 47096.2 Da PI: 4.8618

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR81887.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.6	8.3e-31	221	279	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ RWR81887.1 221 SDHWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRNDPNMLVITYTSEHNHP 279 69***********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MCSFWQGMES DQGDLEDIVR AGAGGVGGEG SSSNPAVDWQ FSLEPTNLTS GIEEPIDDLG 60 YAFSNMPDPL LHELDFAAGS VFFNGSNSNM DLAKMNARGD GSVGGNNFLA QKMLGEETKR 120 PPNIFSRMLQ ISPTVKTAIS PRENSPMVSA SPRAIKPSPL EGYDMIKSNS SMNCSVDNGI 180 VQISTPRNQG IKRRKNQAKQ VVCIPAPAAA NNRPTGEVVP SDHWAWRKYG QKPIKGSPYP 240 RGYYRCSSSK GCSARKQVER SRNDPNMLVI TYTSEHNHPW PTQRNALAGS TRSQPTKNNS 300 ATKSLPSTLT SKPTTLKEEH KENDTDNASS AITVGGSTTS GGTVKDEMRE IEKEMSMDVE 360 DQEYDQGLSH SYRPLMIESN QSEDFFADLG ELEPDPLNLM FPQGFTAEKS DEERVDKSLD 420 PFSLFDWSGN

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MCSFWQGMES DQGDLEDIVR AGAGGVGGEG SSSNPAVDWQ FSLEPTNLTS GIEEPIDDLG  60
YAFSNMPDPL LHELDFAAGS VFFNGSNSNM DLAKMNARGD GSVGGNNFLA QKMLGEETKR  120
PPNIFSRMLQ ISPTVKTAIS PRENSPMVSA SPRAIKPSPL EGYDMIKSNS SMNCSVDNGI  180
VQISTPRNQG IKRRKNQAKQ VVCIPAPAAA NNRPTGEVVP SDHWAWRKYG QKPIKGSPYP  240
RGYYRCSSSK GCSARKQVER SRNDPNMLVI TYTSEHNHPW PTQRNALAGS TRSQPTKNNS  300
ATKSLPSTLT SKPTTLKEEH KENDTDNASS AITVGGSTTS GGTVKDEMRE IEKEMSMDVE  360
DQEYDQGLSH SYRPLMIESN QSEDFFADLG ELEPDPLNLM FPQGFTAEKS DEERVDKSLD  420
PFSLFDWSGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30650.1	7e-79	WRKY family protein