PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR81795.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 471aa MW: 52135.5 Da PI: 9.0106

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR81795.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.2	3.5e-33	194	250	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers d+++ ei+Y+geHnh+k RWR81795.1 194 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSL-DGQIAEIVYKGEHNHPK 250 9*************************************.*************85 PP
2	WRKY	103.7	9.9e-33	396	453	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+vkg+++prsYYrCt ++C+v+k+ver+++dp+++++tYeg+Hnhe RWR81795.1 396 GDGFRWRKYGQKVVKGNPYPRSYYRCTGHKCNVRKHVERASDDPRAFITTYEGKHNHE 453 6********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MEVKDAERTV IAKPIASRPS CSHFKSFSEL LAGAINASPP SSCVETTAAI RPKTVRFKPP 60 VEKAPLQVVS SKADESGTAV CNLSVNVLKP DHELTVVYKP MAKLVSRKTA SILANLGNFD 120 ISHQQALLQL QAQVQVPDQV KYDFQTQPTT NAHQKLSLQM DTNQISDPSM LQSQNMEESQ 180 RAQLMSNTDR PSYDGYNWRK YGQKQVKGSE YPRSYYKCTH PNCPVKKKVE RSLDGQIAEI 240 VYKGEHNHPK PQPPKRLSSG TQGHGQAFIS DGFEPVSGNP LWSSPLSDGI ERSATRTENG 300 SYIGSSINRI NPVKLLLPRE PVMDNALSSG VRTPDNSCGL SGDCEEPSKG VDENDDEPSC 360 KRRKKDNQAN EVHPLGQGVQ EPRIVVQSST ESEIVGDGFR WRKYGQKVVK GNPYPRSYYR 420 CTGHKCNVRK HVERASDDPR AFITTYEGKH NHEMPVSRSL NGGASAQTHL I

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MEVKDAERTV IAKPIASRPS CSHFKSFSEL LAGAINASPP SSCVETTAAI RPKTVRFKPP  60
VEKAPLQVVS SKADESGTAV CNLSVNVLKP DHELTVVYKP MAKLVSRKTA SILANLGNFD  120
ISHQQALLQL QAQVQVPDQV KYDFQTQPTT NAHQKLSLQM DTNQISDPSM LQSQNMEESQ  180
RAQLMSNTDR PSYDGYNWRK YGQKQVKGSE YPRSYYKCTH PNCPVKKKVE RSLDGQIAEI  240
VYKGEHNHPK PQPPKRLSSG TQGHGQAFIS DGFEPVSGNP LWSSPLSDGI ERSATRTENG  300
SYIGSSINRI NPVKLLLPRE PVMDNALSSG VRTPDNSCGL SGDCEEPSKG VDENDDEPSC  360
KRRKKDNQAN EVHPLGQGVQ EPRIVVQSST ESEIVGDGFR WRKYGQKVVK GNPYPRSYYR  420
CTGHKCNVRK HVERASDDPR AFITTYEGKH NHEMPVSRSL NGGASAQTHL I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	1e-105	WRKY family protein