PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR81632.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | WOX | ||||||||
Protein Properties | Length: 213aa MW: 23919.9 Da PI: 6.2682 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.4 | 8.1e-21 | 8 | 67 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq+ +Le+l+++ ++ps+ee++++A++l +++ ++V++WFqNr+a+ ++ RWR81632.1 8 SRWSPTKEQISALEDLYREgLQTPSTEEIQQIASNLraygHIEGKNVFYWFQNRKARLRQ 67 6*****************99*************************************996 PP | |||||||
2 | Wus_type_Homeobox | 106 | 2.3e-34 | 7 | 69 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +RW+Pt+eQi Le+ly++Gl+tP++eeiq+i+++L++yG+ie+kNVfyWFQNrkaR rq+q RWR81632.1 7 ISRWSPTKEQISALEDLYREGLQTPSTEEIQQIASNLRAYGHIEGKNVFYWFQNRKARLRQRQ 69 58***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MQMASSISRW SPTKEQISAL EDLYREGLQT PSTEEIQQIA SNLRAYGHIE GKNVFYWFQN 60 RKARLRQRQR QEPRLYMSRL VRNRPKVPIL PASTTNNTTC PDVLGNALCF SQSAIGFYTQ 120 LPAALFPEGV SEIPKISQRT VGLPFPYEYL DPIDGVSDAN QHGQANDTNK LQTLELFPLH 180 PTGILGEWSE MSSPSSVITS SPLSSETTIQ DFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59340.1 | 6e-29 | WOX family protein |