PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR81404.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 331aa MW: 35204.5 Da PI: 8.6106 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.6 | 1.7e-19 | 12 | 57 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ l ++v+++G+++W++I++ ++ gR++k+c++rw + RWR81404.1 12 KGPWSPEEDDALQKLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 57 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 57.5 | 3.1e-18 | 66 | 108 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +v+a++++G++ W+tIar + gRt++ +k++w++ RWR81404.1 66 PFTPEEDETIVRAHAKFGNK-WATIARLLS-GRTDNAIKNHWNST 108 89******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence |
MASSRKDMDR IKGPWSPEED DALQKLVQKH GPRNWSLISK SIPGRSGKSC RLRWCNQLSP 60 QVEHRPFTPE EDETIVRAHA KFGNKWATIA RLLSGRTDNA IKNHWNSTLK RKCSSSASDD 120 AASAAAGEFQ PLKRTASGGG GSGNIPTVSG LCLSPGSPSG SDVSDSSLPS PIMAPPPPPP 180 PPPVSHIYRP VARTGAILPM EVTSSSDDPP TSLSLSLPGT AVDSGDSSNA GGSGSTQSNP 240 NHLQSLLPSD PSPPPPPQPN IRFCDLGSFG SASPPERPHF PFSPEFLSVM QEMIKKEVRN 300 YMSGLEQNGI CFSAESVRNA AVKRMGIAKI E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 3e-76 | MYB family protein |