PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR81263.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 488aa MW: 54280.4 Da PI: 7.4197

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR81263.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.6	5.2e-33	241	298	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers +++++ei+Y+g+Hnh+k RWR81263.1 241 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL-EGHITEIVYKGTHNHPK 298 8**************************************.*************85 PP
2	WRKY	100.9	7.8e-32	408	466	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+ +prsYY+Ct+ gC+v+k+ver+++d + v++tYeg+Hnh+ RWR81263.1 408 LDDGYRWRKYGQKVVKGNSNPRSYYKCTQVGCTVRKHVERASNDLRDVITTYEGKHNHD 466 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MASSTQTSAN SHQAFSFPTQ FMTSFTDLLS ADDHMDNRSR TGSNLGFWDS TPDSISGRMT 60 QSKPITPISP PPFSPSSFLS TPHGLSFSEL LDSPVLFSTS NILPSPTTGA FSAQAFNWRG 120 NSSNYQQGIK EEENGYSGFS FEPNMTSVAS TLSMFQPSSA ATSVEGSSKA KEHPWNYQEP 180 TKTIEFSAFK NNIKADYVPP SRAISVSEIT TTKTKIDGVG GLQSDHNSHS ERPYLREQRS 240 DDGYNWRKYG QKQVKGSENP RSYYKCTFPN CPTKKKVERS LEGHITEIVY KGTHNHPKPQ 300 STRRTSASSQ AIQLSIASGN TDNLLAGYAD LQMESVATPE NSSVSIGDED FKQSSQRSKS 360 GEDEVDDDEP EAKRWKMENE SESISAYGNR AVREPRVVVQ TTSDVDFLDD GYRWRKYGQK 420 VVKGNSNPRS YYKCTQVGCT VRKHVERASN DLRDVITTYE GKHNHDLPAA RRSAAHTTNR 480 SSYPSQWQ

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MASSTQTSAN SHQAFSFPTQ FMTSFTDLLS ADDHMDNRSR TGSNLGFWDS TPDSISGRMT  60
QSKPITPISP PPFSPSSFLS TPHGLSFSEL LDSPVLFSTS NILPSPTTGA FSAQAFNWRG  120
NSSNYQQGIK EEENGYSGFS FEPNMTSVAS TLSMFQPSSA ATSVEGSSKA KEHPWNYQEP  180
TKTIEFSAFK NNIKADYVPP SRAISVSEIT TTKTKIDGVG GLQSDHNSHS ERPYLREQRS  240
DDGYNWRKYG QKQVKGSENP RSYYKCTFPN CPTKKKVERS LEGHITEIVY KGTHNHPKPQ  300
STRRTSASSQ AIQLSIASGN TDNLLAGYAD LQMESVATPE NSSVSIGDED FKQSSQRSKS  360
GEDEVDDDEP EAKRWKMENE SESISAYGNR AVREPRVVVQ TTSDVDFLDD GYRWRKYGQK  420
VVKGNSNPRS YYKCTQVGCT VRKHVERASN DLRDVITTYE GKHNHDLPAA RRSAAHTTNR  480
SSYPSQWQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-101	WRKY family protein