PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR81072.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 281aa MW: 31668.6 Da PI: 8.7508

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR81072.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.6	2.9e-33	27	81	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtp+LH+rFv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl RWR81072.1 27 KPRLRWTPDLHDRFVDAVTKLGGPHKATPKSVLRLMGLKGLTLYHLKSHLQKYRL 81 79****************************************************8 PP
2	Myb_DNA-binding	68.5	1.1e-21	29	80	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++vdav++lGg+ t+k++ r mg kg+tl+++ks++qky+ RWR81072.1 29 RLRWTPDLHDRFVDAVTKLGGPhkaTPKSVLRLMGlKGLTLYHLKSHLQKYR 80 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MFGQQMERGC GSYQCETGVV SLSRDPKPRL RWTPDLHDRF VDAVTKLGGP HKATPKSVLR 60 LMGLKGLTLY HLKSHLQKYR LGKQAKKEAT QEESKGNSEG NSYSNSSGTN CNASTRNNEG 120 EIPVAEALRY QIEVQRQLHE QLEVQKKLQM RIEAQGKYLQ AILEKAQKSL SSDGNSLGSL 180 EATRAQLTDF NLALSGLMEN MNQAGEARHG DLGKRILPDN YAKTHHLVLQ LYQGEQEQEN 240 KEVKNEVQDE STLFDLNVKG SHEFFGTKGS DLDLKMHTWR R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	2e-62	G2-like family protein