PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR80634.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 346aa MW: 39213 Da PI: 5.0527 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.3 | 1.8e-13 | 14 | 59 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W +eEde+l d+v+++G+++W++I ++ + Rt+k+c++rw + RWR80634.1 14 KGPWMAEEDEILMDYVNKYGPRDWSAIRSKGLLPRTGKSCRLRWVN 59 79*************************8876677**********87 PP | |||||||
2 | Myb_DNA-binding | 43.6 | 6.6e-14 | 70 | 110 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++++eE+ +d+ +q+G++ W++Ia +++ gRt++++k++w RWR80634.1 70 KFSAEEERVVIDLQAQFGNK-WARIATYLP-GRTDNDVKNFWS 110 79******************.*********.***********5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 346 aa Download sequence |
MEGRRRDDGM AIRKGPWMAE EDEILMDYVN KYGPRDWSAI RSKGLLPRTG KSCRLRWVNK 60 LKPDLKTGCK FSAEEERVVI DLQAQFGNKW ARIATYLPGR TDNDVKNFWS TRQKRLARIL 120 QTSSPPKSNK NHSKLPVFHC ESQALEVAAA IASDEQSTAH PIKEATSNDK DSSKSESGSC 180 EDSALCSMPF QEESSNGQCG EPMYSLGNSD VIKMVPLPDL INPNLLNLET NLQAPDEFIR 240 LDKKPCLDPS LQFPPTHFPQ QPLDIPPLSW SHDLSTGFID ASFLDIYRDA SEKDLQFPFE 300 LPFTPLEVNH HCTKRQDNDL TTPDSFFHDF PTDMFDHLEP LPNSSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60460.1 | 1e-64 | MYB family protein |