PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80505.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 360aa    MW: 40319.1 Da    PI: 8.1296
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80505.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY82.63.9e-26214273259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK++ +s+fprsYYrC+++  gC +kkkv+r ++ p+++eitY+  H+++
  RWR80505.1 214 EDGYTWRKYGQKTILNSKFPRSYYRCAHKnlGCVAKKKVQRMDDYPDMMEITYHFLHTCR 273
                 7****************************999*************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MDVKHEAAKY IRYGCELARQ LESDPPNLVE NPSHPLLPIK IDEIVGTFNM AKALLGYHSH  60
NPSSSSSSPP SSSYAHMILG QLSVPPRHEM GLPKAEDLLG GALTQPMDLL HALGVGVMSG  120
TETGMLEAPQ WGLEVPAGDS GRTFELALGG MQVDYVGSRD VHGMQMEESD STRSPSHRLR  180
TRRESRETYK EVVPAPIPAP APGPNTGNAE VVPEDGYTWR KYGQKTILNS KFPRSYYRCA  240
HKNLGCVAKK KVQRMDDYPD MMEITYHFLH TCRTPPLLHS SSSTRAMFEA PPHHHHHHHP  300
HPPHPPQFGW AAGFLGNLRW TRKTKMTLMR ATCRFIADKR VEVELERVAV CMWRLPTCEM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.16e-25WRKY family protein