PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80504.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 199aa    MW: 21835.6 Da    PI: 9.7686
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80504.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY80.91.4e-25132192259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 dDg+ WrKYGqKe+ g+++pr+Y+rCt++   gC+++k+v++s++dp++ ++tY g+H+++
  RWR80504.1 132 DDGHIWRKYGQKEILGATYPRGYFRCTHKhdqGCQATKHVQKSENDPSLYVVTYMGQHTCK 192
                 8***************************99999**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MGSTLSENSP PMPCDRQMVI QELINGQKLT SELQILFGKA SEQGVSPAAK ALAEKISRSI  60
AGAISILNSG ETHEGCWNSA TTHHCSAPSG DRKIKGSGEK QKIPAAKDQR SGHKRRRTST  120
TASRLLSATP YDDGHIWRKY GQKEILGATY PRGYFRCTHK HDQGCQATKH VQKSENDPSL  180
YVVTYMGQHT CKDVLKTPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-29WRKY family protein