PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR80375.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 546aa MW: 62962.3 Da PI: 4.9281

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR80375.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	126.8	1.7e-39	4	124	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 p G+rFhP+deel+ yLk+k+++ +l+ ++i+ev++yk++P+++ +++e+++yfF+++ +ky +g+r+nr+t++gyWka+ d ++++++++++ RWR80375.1 4 PCGYRFHPRDEELL-VYLKRKIHNLPLPS-DIINEVELYKYDPSQFL---SKGEEKCYFFTPTYRKYVNGSRPNRSTNNGYWKASTADAQIKDERNKDI 97 89**********.8********9.99*********95...457899*************************************** PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g+k+tLvfy p+g+kt+W+mhey+l RWR80375.1 98 GTKRTLVFY-YGGPHGRKTNWIMHEYKL 124 *****.568999********97 PP
2	NAM	91.5	1.4e-28	185	286	27	128
NAM 27 kleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmh 124 +l++ ++ikev++yk+ P++L + v+++e+++yfF+++ +k+ +g+r+nr+t++gyW+a+ +++ +++++++g+k++Lvf+ g++p+g+k++W+mh RWR80375.1 185 PLPC-DIIKEVELYKYGPSELTdQFVSKGEEKCYFFTPTYRKSVNGTRPNRTTSNGYWRASTAVTPIEDERNNEIGTKRSLVFHYGDHPHGRKSNWIMH 282 4556.78************966777788899************************************************************** PP NAM 125 eyrl 128 ey+l RWR80375.1 283 EYKL 286 97 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MTVPCGYRFH PRDEELLVYL KRKIHNLPLP SDIINEVELY KYDPSQFLSK GEEKCYFFTP 60 TYRKYVNGSR PNRSTNNGYW KASTADAQIK DERNKDIGTK RTLVFYYGGP HGRKTNWIMH 120 EYKLMENQNT ASVQAPSDPM KLDEWVLCSI YENLSSDKRE KRKRNATEEL DTRTEKRALV 180 IHNLPLPCDI IKEVELYKYG PSELTDQFVS KGEEKCYFFT PTYRKSVNGT RPNRTTSNGY 240 WRASTAVTPI EDERNNEIGT KRSLVFHYGD HPHGRKSNWI MHEYKLIENQ STTHLDEWVL 300 CSIYENLCAD EREKRKRKRK ATEKLDTRKE KRAIVVQQEP QVQINEYKDN DQSVVASYDN 360 LQKEPVHDAL DMGGDIAPMS DPDVADFATE LMEMVAKEEL GTISEESVTV VQQEQPHIKI 420 SEYTDSDQSV VSSGDNLEKG LMHDASDMSW DIPPMSDSDF ADFDKLMEMM AREELDRGSE 480 INVVQQEPQI KISGNNAVFS YDDLPKGPID ASDRLGWDIA PISDSDYANF VELMEKLNAT 540 PTHDSS

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MTVPCGYRFH PRDEELLVYL KRKIHNLPLP SDIINEVELY KYDPSQFLSK GEEKCYFFTP  60
TYRKYVNGSR PNRSTNNGYW KASTADAQIK DERNKDIGTK RTLVFYYGGP HGRKTNWIMH  120
EYKLMENQNT ASVQAPSDPM KLDEWVLCSI YENLSSDKRE KRKRNATEEL DTRTEKRALV  180
IHNLPLPCDI IKEVELYKYG PSELTDQFVS KGEEKCYFFT PTYRKSVNGT RPNRTTSNGY  240
WRASTAVTPI EDERNNEIGT KRSLVFHYGD HPHGRKSNWI MHEYKLIENQ STTHLDEWVL  300
CSIYENLCAD EREKRKRKRK ATEKLDTRKE KRAIVVQQEP QVQINEYKDN DQSVVASYDN  360
LQKEPVHDAL DMGGDIAPMS DPDVADFATE LMEMVAKEEL GTISEESVTV VQQEQPHIKI  420
SEYTDSDQSV VSSGDNLEKG LMHDASDMSW DIPPMSDSDF ADFDKLMEMM AREELDRGSE  480
INVVQQEPQI KISGNNAVFS YDDLPKGPID ASDRLGWDIA PISDSDYANF VELMEKLNAT  540
PTHDSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	314	320	KRKRKRK
2	315	320	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	3e-46	NAC family protein