PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80315.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 318aa    MW: 35523.2 Da    PI: 5.9596
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80315.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.32.5e-31145203259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers+ dp++++itY+ eHnh+
  RWR80315.1 145 SDMWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERSRADPTMFIITYTAEHNHP 203
                 79*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MADWDLEAVV RGCRSSNLSS SPPTTTTTGA GTEIDPLAFF TQTLLQEEED DHLSYIPDHI  60
ATQTCMQELE ELCRPFYHKT PQPISPKTHS IISNSPISAF NEQQQQQQQK KTAHSSSNTQ  120
ISRSKRRKNQ QKRVVCEVPA EGLSSDMWAW RKYGQKPIKG SPYPRGYYRC SSSKGCLARK  180
QVERSRADPT MFIITYTAEH NHPLPTHRNS LAGSTRNKCS TDQSIKPSTS SGLSPTTPLT  240
SSMEEDILGH KQEEEAGEVK LEQDRDHEMS TQMSDDMFFD LEELRESTST SGSFDDCLSD  300
HFSPWASSFA SSAASVGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.11e-61WRKY family protein