PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80234.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 344aa    MW: 37444.4 Da    PI: 6.3994
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80234.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.26.9e-28126186259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 dDg +WrKYGqK++ g+++pr+YYrCt++   gC +kk+v+rs+edp++++++Y+g+H+++
  RWR80234.1 126 DDGNSWRKYGQKDILGAKYPRAYYRCTHRnvqGCAAKKQVQRSEEDPSIFQVMYQGHHTCK 186
                 8***************************98999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MESAGDWEKR LVINELMQGH ELTKQLRNHL SPSSPGELLT QKILSSFNKA LFMLKSSDSE  60
GEPQLTGPAS GTDSPHSVSE SPRSENSNRA FLDPECRDGS KKRKTQPKWS EQVRVSSGPS  120
LEGPPDDGNS WRKYGQKDIL GAKYPRAYYR CTHRNVQGCA AKKQVQRSEE DPSIFQVMYQ  180
GHHTCKQATN VIRGASPASP ELKEQQQQQQ PQQGVLLNFK TGLKVRTEDL DTQGVNSSSF  240
SFPNASIQGA NVGECIFSSS SLDSPFMSTF SPPFMSPATS GSNYFSSVSP CHMNSYGGGG  300
STSMPTSVTS DINEIISAVT SGSNSSLVDL EFSLDQFDAS TFLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.12e-54WRKY family protein