PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR79606.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GeBP
Protein Properties Length: 314aa    MW: 34768.2 Da    PI: 9.4986
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR79606.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57381.51.2e-2574168297
      DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                 +f+r+w e+Dei +LqGl+d  + +g     d++ f++ ++ks+   +++sql+eK+rrLKkKf+  +++ ++g + ++ ++hd+  ++lsk++W+
  RWR79606.1  74 KFHRIWQESDEIRFLQGLLDS-SAHGFVFPRDLNPFFDRFSKSMAQPYTRSQLSEKLRRLKKKFRVISARLDRGLDAALLTPHDRALLHLSKQLWH 168
                 699*****************9.677988889****************************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MATPHQPHHL HHIPIKAAAR KLPIKRKNPE PDFSPNPNFF VKPETPSSSS DPLVAEDDDG  60
EEEGEEDLKP PPFKFHRIWQ ESDEIRFLQG LLDSSAHGFV FPRDLNPFFD RFSKSMAQPY  120
TRSQLSEKLR RLKKKFRVIS ARLDRGLDAA LLTPHDRALL HLSKQLWHPA FAASSPFSSS  180
GKKKSGISVS SPIPTPRPPP CTNGGHNFNG EGGFSHSSGG GGLGRGVAKA VMDVFDQSLQ  240
EMRVALAHGG ILFDHAAAPG PDQGKARDLA RKWQEHKVAE LDVLASRLSR SKLEREIHPP  300
INEEEIITSN SSNH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.21e-14GeBP family protein