PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR79555.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 388aa MW: 43302.3 Da PI: 6.6372

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR79555.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.2	2.9e-31	199	252	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ RWR79555.1 199 PRMRWTTSLHARFVRAVDFLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 252 9****************************************************7 PP
2	Myb_DNA-binding	45.3	2.1e-14	200	251	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av lGg+ t+k++ + m k +tl ++ks++q+y+ RWR79555.1 200 RMRWTTSLHARFVRAVDFLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 251 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MPLQHVFMDP TPDLTLRICP PNSAPSSMCD CNNEQENGLD LFKSNSEGSV RPDSHAYSEL 60 SLINPAMEGE SPCRRSYVRQ NPDQEVPQYQ YLQHQNSNMG SWSPSLCSSL LPSSSCSCSS 120 LTPPSMERGR ESSVPSNSPC SKVYEIAGGM RFNGCSGDLL KPLNWYPHFG IGAPEACSQA 180 MIRSRFMTKF PTKRSMRAPR MRWTTSLHAR FVRAVDFLGG HERATPKSVL ELMDVKDLTL 240 AHVKSHLQMY RTIKNTDRPS PPSEEGQSFG SSEENFTPTA DFSSNINFQR LMEKRGLDGS 300 LQQDIDHPFS TSLSSNSSSV GAWMQTNRSD INEIRAACIS LGQRSGHPFE ESDSTQWISS 360 RVSHLELKNP SLEFALGGSY WHGKEQDW

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MPLQHVFMDP TPDLTLRICP PNSAPSSMCD CNNEQENGLD LFKSNSEGSV RPDSHAYSEL  60
SLINPAMEGE SPCRRSYVRQ NPDQEVPQYQ YLQHQNSNMG SWSPSLCSSL LPSSSCSCSS  120
LTPPSMERGR ESSVPSNSPC SKVYEIAGGM RFNGCSGDLL KPLNWYPHFG IGAPEACSQA  180
MIRSRFMTKF PTKRSMRAPR MRWTTSLHAR FVRAVDFLGG HERATPKSVL ELMDVKDLTL  240
AHVKSHLQMY RTIKNTDRPS PPSEEGQSFG SSEENFTPTA DFSSNINFQR LMEKRGLDGS  300
LQQDIDHPFS TSLSSNSSSV GAWMQTNRSD INEIRAACIS LGQRSGHPFE ESDSTQWISS  360
RVSHLELKNP SLEFALGGSY WHGKEQDW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	6e-44	G2-like family protein