PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR79499.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 279aa MW: 31741.2 Da PI: 7.3658 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.4 | 1.1e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ +Ede+l ++k +G g W+ +++ g++R++k+c++rw++yl RWR79499.1 14 RGAWSVQEDEILSSYIKTHGEGKWRDMPKRAGLRRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.7 | 9.9e-17 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ ++eE++l+++++k+lG++ W++Ia +++ gRt++++k++w++ RWR79499.1 67 RGNISPEEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 110 7899******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MGRRPCCSKE SVNRGAWSVQ EDEILSSYIK THGEGKWRDM PKRAGLRRCG KSCRLRWLNY 60 LRPDIKRGNI SPEEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT SLRKRVKAQP 120 LSKTTIQDQT NSESKERRPS IGGPDKEPLT YIGPHQVIRA KAVRCTKLFL PPQQEGEPMS 180 QNDLELGPSE IQPLISPRKD DCLNFLMDFD MSGIFASEMI ESDCMMQVAG DEMNEKISNA 240 MGGEYGHHMA LSDVEIGDWR ESCSFQNGVG LELEMLGLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 3e-62 | MYB family protein |