PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR79498.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 236aa MW: 27266.7 Da PI: 7.5061 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.8 | 1e-17 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l ++++ +G ++W++++++ g++R++k+c++rw++yl RWR79498.1 16 KGAWTEEEDRKLSQCIQTHGEKRWRLVPSKAGLNRCGKSCRLRWLNYL 63 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 47.1 | 5.4e-15 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+l ++ W++Ia +++ gRt++++k++w+++l RWR79498.1 69 RGNISDQEEDLIIRLHKLLENR-WSLIAGRLP-GRTDNEIKNYWNSHL 114 78999*****************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MAPKNNNGSS KMHVNKGAWT EEEDRKLSQC IQTHGEKRWR LVPSKAGLNR CGKSCRLRWL 60 NYLRPNIKRG NISDQEEDLI IRLHKLLENR WSLIAGRLPG RTDNEIKNYW NSHLSKRVTN 120 DTAQKEKQGP EQSYNSKLPL KDNGEVSKWS PELKDNDFLA GEFKVEELFD FQEVERAGTL 180 LGPHEEKKKT AIERFDGSVV LPNEGQLNLD WVRELLEFDE EAGAKEWCMS LVSSFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 1e-52 | MYB family protein |