PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR79206.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WOX

Protein Properties

Length: 276aa MW: 31480.8 Da PI: 8.3071

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR79206.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.1	1.7e-19	43	103	3	57
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+ +t++q+++L++l+++ r psae++++++++l +++ ++V++WFqN++a+e++ RWR79206.1 43 TRWIPTTDQIRILKDLYYNngVRSPSAEQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 103 8***************8678***********************************97 PP
2	Wus_type_Homeobox	111.2	5.5e-36	41	105	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRW Pt++Qi+iL++ly+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+ RWR79206.1 41 STTRWIPTTDQIRILKDLYYnNGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 105 689*************9779***************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MEPQHYQQHH HHQQQQQQQQ NINEDSSSST SSKSSFLCRQ STTRWIPTTD QIRILKDLYY 60 NNGVRSPSAE QIQRISARLR QYGKIEGKNV FYWFQNHKAR ERQKKKFTAD VATMQRGWKP 120 EDPIPNKYTN MGFSHSSSST SPSPGVLAVG QMGSIGCFRS VQECSIQRGG YGGNNVAWVG 180 METCSSPYSL FETRMPIEPF DTAAAATNVE TLPLFPMRGD EHSSRNNDDT AKPEYFSGWY 240 FEEDEEEKKK KMGSTSLELR LNSYSAGAPD VTWPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	1e-41	WOX family protein