PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR79060.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 369aa    MW: 40979.1 Da    PI: 7.134
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR79060.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY893.9e-28201261259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 dDgy+WrKYGqKe+ +s+fprsYYrCt++   gC +kk+v+r ++dp ++e++Y+g+H+++
  RWR79060.1 201 DDGYTWRKYGQKEILKSKFPRSYYRCTHKsfyGCDAKKQVQRLDDDPYTFEVMYRGTHTCQ 261
                 8***************************99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MKDTMDEKFE ALSSILQGCE LAKQLQTNLP TLANQPSSLL SSCEEITRAF NKAMFILNPH  60
HPAAYSHQMF GGPSESSSKA QHMERGGYTQ AMDIFYAHAL GRNPFDVRLL PERSMVPTEH  120
LSVAPVVELA TDMLRVNAGE AEASGRPRPI GELQASDTSD SGGSSMGGMP VQRSRRRKDS  180
REVRMIRVSA PRTGNVEIPP DDGYTWRKYG QKEILKSKFP RSYYRCTHKS FYGCDAKKQV  240
QRLDDDPYTF EVMYRGTHTC QTSTTPLILT TQETRSAEVL EATHLQTSLG VSTSIQLAPF  300
FPREAEVGPK DKNTLINFPH VCSGMQGESS HVQGGKDMDF PVVDFAAAMF NPRGSSDNID  360
SIFSTKKEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.14e-39WRKY family protein