PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR78726.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | TCP | ||||||||
Protein Properties | Length: 169aa MW: 17842.1 Da PI: 9.2145 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 121.3 | 1.1e-37 | 35 | 105 | 2 | 72 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssase 72 a++k++++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLlqqa+p+i+++tgt++++a+ RWR78726.1 35 AVRKRPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLQQAEPSIIAATGTGTNPAQP 105 789*************************************************************9999954 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MYNNDPPPPI GALTVTEPLL QLHPSSTTTT STALAVRKRP SKDRHSKVDG RGRRIRMPII 60 CAARVFQLTR ELGHKSDGQT IEWLLQQAEP SIIAATGTGT NPAQPYKSGG SAGLWGLSAR 120 PDLGQLWSFA SNEINVPPAG AGFDLRDVGG GGGNERGGAS LMLEEGLGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08330.1 | 4e-41 | TCP family protein |