PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78061.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GATA
Protein Properties Length: 277aa    MW: 30827.8 Da    PI: 9.0014
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78061.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.71.9e-19150183134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  RWR78061.1 150 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 183
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MTSFYLNPPS PFPLVEGSQG QDHLLFTLTS ETFSSSSPIY FKATQELGDY DGDHQEHRQP  60
PQRHKLEADF QFSTGSSDHG YNNSCIKPSS IVKRDDVHSD PCDNAPIKWM SSKMRIMRKM  120
MNSDRTVNNK LTKECPIDQN NSTNTVIRVC SDCNTTKTPL WRSGPRGPKS LCNACGIRQR  180
KARRAMAAAT AAASGGMVSS DPSMNSEMPK EKSPDSNCTT QYKKKCKVAG PRTKKQLQFD  240
DFIVSLSKNS SFHQVFPQDE RDAAILLMAL SCGLVRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.11e-21GATA family protein