PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR77433.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

CPP

Protein Properties

Length: 656aa MW: 72836.8 Da PI: 5.4058

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR77433.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.6	2.8e-14	578	616	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +++C+CkkskClk+YC+Cfaag++C C+C+dC Nk e RWR77433.1 578 CNRCHCKKSKCLKLYCQCFAAGEYCIGLCSCKDCYNKPE 616 689*********************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 656 aa Download sequence
MGSPEMNRMY TSSSSSLSPS SSSLQDSHLF NYHSNLTPLN LHKLPHVTAT CNEFNFSSPP 60 QVFASPHVCS DHEAGFMKRP PYQSRNSSDA GKCFEHGAQG KILAAAPDVA QPSINLSAVE 120 LIPSTRMGIE PCTTSGIVDK FLVDHSNECG TDAPDLWSKK AAIMPRFLQS GWSSPNELLA 180 DNDGICEDEG TEADETRTSS EQPEDNQACE KSFPNMEIVE TASHKPEQKN DGRPSNESQD 240 LVFKNVNCFM DDFLFIKSAS CQEDDPHFLD WTANELTSLL SSSKEYGFVE CGKEMPLHSS 300 DLDQHGTEDI KPHFAEGRQQ GEEQFTPQIL PESFHNDQVD DIHYENDGEI SLRKVKNWMP 360 HECKESAQQR GMRRRCLRFD ASEAIRKRVG CSGSWNATGV SIVRSPSRVT ESEILNTSNV 420 VSNKISSNNQ VVNFSSNASY KLSKQPSKTP EDHMDEVERP AQNSGGTPVT AATPTGIGLH 480 LNRIGYDVAD SCNLNWQLTA KDYLNVKGKN SLPETNLQIS SFVNPSKSSL QINLTEQHAM 540 PIVNKRRPLE DVSNSVFNQM NSRQNKKKEA HSVESEGCNR CHCKKSKCLK LYCQCFAAGE 600 YCIGLCSCKD CYNKPEYEDT VLDAKEQIES REPNAFAPKI TQFAAESPRN SGVRTL

Sequence ? help Back to Top

Protein Sequence Length: 656 aa Download sequence

MGSPEMNRMY TSSSSSLSPS SSSLQDSHLF NYHSNLTPLN LHKLPHVTAT CNEFNFSSPP  60
QVFASPHVCS DHEAGFMKRP PYQSRNSSDA GKCFEHGAQG KILAAAPDVA QPSINLSAVE  120
LIPSTRMGIE PCTTSGIVDK FLVDHSNECG TDAPDLWSKK AAIMPRFLQS GWSSPNELLA  180
DNDGICEDEG TEADETRTSS EQPEDNQACE KSFPNMEIVE TASHKPEQKN DGRPSNESQD  240
LVFKNVNCFM DDFLFIKSAS CQEDDPHFLD WTANELTSLL SSSKEYGFVE CGKEMPLHSS  300
DLDQHGTEDI KPHFAEGRQQ GEEQFTPQIL PESFHNDQVD DIHYENDGEI SLRKVKNWMP  360
HECKESAQQR GMRRRCLRFD ASEAIRKRVG CSGSWNATGV SIVRSPSRVT ESEILNTSNV  420
VSNKISSNNQ VVNFSSNASY KLSKQPSKTP EDHMDEVERP AQNSGGTPVT AATPTGIGLH  480
LNRIGYDVAD SCNLNWQLTA KDYLNVKGKN SLPETNLQIS SFVNPSKSSL QINLTEQHAM  540
PIVNKRRPLE DVSNSVFNQM NSRQNKKKEA HSVESEGCNR CHCKKSKCLK LYCQCFAAGE  600
YCIGLCSCKD CYNKPEYEDT VLDAKEQIES REPNAFAPKI TQFAAESPRN SGVRTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	3e-28	CPP family protein