PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR77269.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family G2-like
Protein Properties Length: 332aa    MW: 36998.7 Da    PI: 8.3627
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR77269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.36.4e-32125178255
     G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 pr+rWt++LH++Fv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  RWR77269.1 125 PRMRWTSTLHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 178
                 9****************************************************7 PP
2Myb_DNA-binding45.61.6e-14126177148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+rWT  ++  +v+av++lGg+   t+k++ + m+ k +tl ++ks++q+y+
       RWR77269.1 126 RMRWTSTLHAHFVHAVELLGGHeraTPKSVLELMNvKDLTLAHVKSHLQMYR 177
                      89************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MRTALTSPNL SLQISPASIW NGDAVDTSFE GSLIRSFLRE GSSRTDSGSS GSDITYDHGL  60
LHLERGGDHH QGEPALNLGL EMAPLDRLPL HHHHFRTLRH PQIYGRDFKR CSTLINGGRR  120
TIRAPRMRWT STLHAHFVHA VELLGGHERA TPKSVLELMN VKDLTLAHVK SHLQMYRTVK  180
STDKGAGQRQ TDMAMNQRTG IAELENVLSC EKPEKSSSQS LMNPSSPPIS PRRASPPTEG  240
NAWSSSIKAN VPTQSCFKYT TPGVEETKVD QYQIAVHMPH NESEKLNLSS LPSPYVDSNL  300
LPKLPNLEFT LGRQSWQMDY AENPNELTLL KC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42630.18e-59G2-like family protein