PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR77186.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GRAS
Protein Properties Length: 427aa    MW: 47611.8 Da    PI: 7.8154
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR77186.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS361.71e-110544251373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.fsevsPilkfshlta 98 
                 l++lLl+cA +vssg+l++a+a+L+++s+l+s +gd+mqRlaa+f+  La+rl++ ++++y al+ ++  +k + + +   +l fs   P++ f+h + 
  RWR77186.1  54 LIQLLLTCAAHVSSGNLNRADACLQQISHLSSVSGDSMQRLAAHFASSLATRLLKGWPGVYTALNQTRLCSKPEPDPTRTARLaFSRSLPYVGFAHAII 152
                 689*************************************************************88887777776666666666*************** PP

        GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  ++I+ a+ +e+ vHi+D++ + ++ W ++l+a++ R+ +gpp l+iT v++    sk+ l  +g++L k Ae+l++pf+fn+l   +l+dl+l++L+v
  RWR77186.1 153 HRTIVHAMTEERVVHILDLGSGDPALWGPILRAFSRRSpHGPPYLKITSVHA----SKDVLDYLGSNLVKEAEALDIPFQFNPL-NLSLKDLTLDQLKV 246
                 *************************************99*************....***************************5.889*********** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres.eerikvErellgr 292
                 ++gEalaV+++l+lh ll+e+++l+   + d +L +v+s+sPk++v+veqe+dhns+++++rf++ l++ysalfds+ea +++ s +er+ vE + lg 
  RWR77186.1 247 RSGEALAVCSMLALHALLAEEACLNPckQMDVFLAMVRSMSPKLFVLVEQESDHNSTRLVDRFVQGLYHYSALFDSIEAAAGSLSgRERMAVEDM-LGA 344
                 ************************987799**************************************************9999999*******9.*** PP

        GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 ei+n+vaceg er+erhe++++W  r+++aGF+pv+l   a++++ +l++ ++ dg++v +e+   +++W++r+L+svSaW
  RWR77186.1 345 EIENIVACEGVERVERHERANRWMVRFGRAGFRPVRLWGVAVEEVMHLVESYGRDGFKVVSERMFEMICWHERALYSVSAW 425
                 ********************************************************************************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    
MVTSQYQTKT QQLEMESSPR PKKPLSLLNL TLSPNTSSKP PPQTSKPEDQ GLRLIQLLLT  60
CAAHVSSGNL NRADACLQQI SHLSSVSGDS MQRLAAHFAS SLATRLLKGW PGVYTALNQT  120
RLCSKPEPDP TRTARLAFSR SLPYVGFAHA IIHRTIVHAM TEERVVHILD LGSGDPALWG  180
PILRAFSRRS PHGPPYLKIT SVHASKDVLD YLGSNLVKEA EALDIPFQFN PLNLSLKDLT  240
LDQLKVRSGE ALAVCSMLAL HALLAEEACL NPCKQMDVFL AMVRSMSPKL FVLVEQESDH  300
NSTRLVDRFV QGLYHYSALF DSIEAAAGSL SGRERMAVED MLGAEIENIV ACEGVERVER  360
HERANRWMVR FGRAGFRPVR LWGVAVEEVM HLVESYGRDG FKVVSERMFE MICWHERALY  420
SVSAWHC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.19e-65GRAS family protein