PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR77183.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 225aa MW: 25575 Da PI: 9.5588 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.9 | 3.5e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr+g+lKKA+E+SvLCda+vavi+fss+gkl ey+s RWR77183.1 9 KRIENKINRQVTFSKRRAGLLKKANEISVLCDADVAVIVFSSRGKLTEYAS 59 79***********************************************86 PP | |||||||
2 | K-box | 69.1 | 1.4e-23 | 87 | 160 | 13 | 87 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekel 87 +es + e++kL+ + L ++Rh++GedL++L+ k+L+q+eqqLe++l++iRs+K++++ ++i lqk + l RWR77183.1 87 LNESGCLESRKLQTMADDLHINIRHMMGEDLDTLTTKQLEQIEQQLEDALQRIRSRKTQVMSDKIAALQKELH-L 160 4577899*************************************************************98543.3 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRAGLLK KANEISVLCD ADVAVIVFSS RGKLTEYASN 60 SSMKGVIQRY ERYSSFGTES DRTSLELNES GCLESRKLQT MADDLHINIR HMMGEDLDTL 120 TTKQLEQIEQ QLEDALQRIR SRKTQVMSDK IAALQKELHL RDTNMAHGNL QQQSSPFFLP 180 IPFSSTGPQF GICQNREVGS EDESRGPPPG RTNSILPHWM LPRQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 7e-58 | MIKC_MADS family protein |