PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR76896.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | C3H | ||||||||
Protein Properties | Length: 363aa MW: 41401.5 Da PI: 4.9416 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 18.2 | 4.4e-06 | 90 | 113 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 k lC ff + G+C G +CkF+H+ RWR76896.1 90 KSILCEFFKA-GQCTKGFKCKFSHD 113 6679**7777.*************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence |
MPPKQQSKSD VAKKQKVVED KTFGLKNKNK SKNVQKYVQS LQQSVQPKPD PSKIAAKKKK 60 EEEKAREKEL NDLFKIAISQ PKVPVGVDPK SILCEFFKAG QCTKGFKCKF SHDLNVQRKG 120 EKIDIYSDKR DQETMEDWDQ ETLEKVVESK KTEYNPNKPT EIVCKYFLEA VEKKQYGWFW 180 VCPNGGKDCH YRHALPSGYV LKSQMKALLE EETEKVSIEE EIENQRAKVA TSTPITTELF 240 MQWKKKKMEA IEAGLAAQRA ERAKNDRMSG RELFLSDASL FVDDAEAYEK YQREEPEVTE 300 DKDKSESSQK GASTSSNADL EEEVLADDDD DDELDMDELN ELEASLSKAS IQIREPAGTE 360 ASN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20280.1 | 1e-156 | C3H family protein |