PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR76824.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 253aa MW: 28359.9 Da PI: 9.2333 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.2 | 0.00016 | 149 | 188 | 11 | 55 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 rR +++ +++ L++l+ + +K + a++L++A+ +Ik Lq RWR76824.1 149 RRSNKLGERITALQQLVSPF-----GKTDTASVLQEATVHIKLLQ 188 78899999*********998.....8****************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 253 aa Download sequence |
MRKSGCDFAG NNQVQMQSSN ASTIELERLN GYSRGFFHDS QLSNDLQLGR FTPLSTVETS 60 QELDYIPGAD VLMTTNPTYL NISHTKFTSR VSPVEDCMEK SRKRTVSFDT INNQTPMKES 120 KKKSVCAQEQ YHLTSKESST IEQLRAPVRR SNKLGERITA LQQLVSPFGK TDTASVLQEA 180 TVHIKLLQDQ IQVLSTPYFR IRQPFHSQSG GEEKNDLRSR GLCLVPVSST ANLTKEDGGM 240 NRCGTGRQVT NRF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G19500.1 | 3e-27 | bHLH family protein |