PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR76772.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | WOX | ||||||||
Protein Properties | Length: 229aa MW: 25664.8 Da PI: 7.9236 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.5 | 7.1e-21 | 23 | 82 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq+ +Le l+++ r+psae++++++++l +++ ++V++WFqN++a++++ RWR76772.1 23 SRWNPTKEQIGVLEGLYKQgIRTPSAEQIQQITSRLraygHIEGKNVFYWFQNHKARQRQ 82 8*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 116.1 | 1.7e-37 | 21 | 84 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+Pt+eQi +Le lyk+G+rtP++e+iq+it++L++yG+ie+kNVfyWFQN+kaR+rqkq RWR76772.1 21 SSSRWNPTKEQIGVLEGLYKQGIRTPSAEQIQQITSRLRAYGHIEGKNVFYWFQNHKARQRQKQ 84 689***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MEEEKSIDMP ISSNGGSGTP SSSRWNPTKE QIGVLEGLYK QGIRTPSAEQ IQQITSRLRA 60 YGHIEGKNVF YWFQNHKARQ RQKQKQESMV YFNRFLHKST PILAPPCTNV VCGAYCIPHP 120 PVGFYPQYPK VLLPGARRRP IEEKVAGKTK ENLCEGYESA HPVNDSMDAE GTMTHETLQL 180 FPLHPTGILK SRSEDPSPST STQTCNTEEG SVEGTSINFW SNHESQAKI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59340.1 | 7e-49 | WOX family protein |