PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR75800.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | WOX | ||||||||
Protein Properties | Length: 248aa MW: 27505.9 Da PI: 5.8837 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 52.7 | 7e-17 | 24 | 84 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ ++e+ F+ +ps++e ++ k+l ++ +++V++WFqNrR + ++ RWR75800.1 24 RSRWTPKPEQIMIMESIFNTgLVNPSKDETVRIRKQLekfgSVADANVFYWFQNRRSRSRR 84 89*****************99*************************************997 PP | |||||||
2 | Wus_type_Homeobox | 105.5 | 3.3e-34 | 23 | 86 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi+i+e+++++Gl++P+k+e+ ri+++Le++G + d+NVfyWFQNr++R+r++q RWR75800.1 23 VRSRWTPKPEQIMIMESIFNTGLVNPSKDETVRIRKQLEKFGSVADANVFYWFQNRRSRSRRRQ 86 589***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MEEDHVHESS NDPSQELERP EPVRSRWTPK PEQIMIMESI FNTGLVNPSK DETVRIRKQL 60 EKFGSVADAN VFYWFQNRRS RSRRRQRQIK ALMANNPQIL SGVSATGAIP YEHTPPLSVG 120 SFASSSSSSP WVMAPSSCEA FDNNGGNNHF SVSQQMGSLE MEQMPMVSSI ILPSNNANLH 180 YQSGLITVFI NGVPSEVPRG PLDMKAMFGQ DVMLVHSSGE PVPVNEIGIS LQSLQPGEHY 240 FLVTGANY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03660.1 | 2e-59 | WOX family protein |