PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75749.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 380aa MW: 42494.6 Da PI: 6.3168

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75749.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	184.6	2.2e-57	16	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdee+v+ yL +kv ++++ + ++i evd++k+ePwdLp k+k +e+ewyfF++rd+ky+tg r+nrat++gyWkatgkdke+++ kg+l RWR75749.1 16 LPPGFRFHPTDEEIVSSYLSEKVVNNSFVC-RAIGEVDLNKCEPWDLPGKAKMGENEWYFFCQRDRKYPTGMRTNRATEAGYWKATGKDKEIYKGKGRL 113 79***********************999.89***********99999****************************************** PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+kktLvfykgrapkgekt+Wvmheyrle RWR75749.1 114 VGMKKTLVFYKGRAPKGEKTNWVMHEYRLE 143 **************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MEDVSGLTIG EDCIDLPPGF RFHPTDEEIV SSYLSEKVVN NSFVCRAIGE VDLNKCEPWD 60 LPGKAKMGEN EWYFFCQRDR KYPTGMRTNR ATEAGYWKAT GKDKEIYKGK GRLVGMKKTL 120 VFYKGRAPKG EKTNWVMHEY RLEGKFSYSN LPKSAKDEWA VCRVFHKSTG LKKSPIQGLV 180 RMDSFGEDLL DYSSLPPLWD PPRFNDDSDH DFNGTTGTST SRGFDGYQTS YFSNGIDGQT 240 DYKNIIPNHP NINHQGNFIN PPQNSILGPQ ISLPNPPLPV PGSANLGYLH PFMNKNTVPN 300 STGFGLNGAD MAIFRALAAT HETSSSNMKC KAEQLSNQSM VSQDTGLTST DVNTEISSQQ 360 SKEMFNNSTF FEGLECLLNY

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MEDVSGLTIG EDCIDLPPGF RFHPTDEEIV SSYLSEKVVN NSFVCRAIGE VDLNKCEPWD  60
LPGKAKMGEN EWYFFCQRDR KYPTGMRTNR ATEAGYWKAT GKDKEIYKGK GRLVGMKKTL  120
VFYKGRAPKG EKTNWVMHEY RLEGKFSYSN LPKSAKDEWA VCRVFHKSTG LKKSPIQGLV  180
RMDSFGEDLL DYSSLPPLWD PPRFNDDSDH DFNGTTGTST SRGFDGYQTS YFSNGIDGQT  240
DYKNIIPNHP NINHQGNFIN PPQNSILGPQ ISLPNPPLPV PGSANLGYLH PFMNKNTVPN  300
STGFGLNGAD MAIFRALAAT HETSSSNMKC KAEQLSNQSM VSQDTGLTST DVNTEISSQQ  360
SKEMFNNSTF FEGLECLLNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.2	1e-109	NAC family protein