PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75260.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 284aa MW: 30509.7 Da PI: 10.229

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75260.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.1	2.8e-31	216	274	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs+fpr+YY+C+s gCp++k+ver+ ++p+++++tYegeH+h+ RWR75260.1 216 ADEYSWRKYGQKPIKGSPFPRGYYKCSSVrGCPARKHVERAPDEPTMLIVTYEGEHRHT 274 69***********************988**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MAIDYMVHSK MDDQMALQEA ASAGLKNMEQ LIYLLSHQAH TQNPLIFSEI TGSTLAKFKK 60 VISILNRTGH ARFRRGSAAP GPGPSASESQ APPQSLTIDF SKPSPSPSPA GAIQPPAPAK 120 ESFTISPMSS GNSSFLSSVT GDGSVSNGKQ GSSLLLAPAP AVSVGKPPLS SSYRKKCQGH 180 SDDASGRCHC SKKRKSRVKN TIRVPAISSK TADIPADEYS WRKYGQKPIK GSPFPRGYYK 240 CSSVRGCPAR KHVERAPDEP TMLIVTYEGE HRHTQTALPT LMFE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	174	195	RKKCQGHSDDASGRCHCSKKRK
2	175	195	KKCQGHSDDASGRCHCSKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31550.1	4e-94	WRKY family protein