PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75175.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 278aa MW: 31191.1 Da PI: 6.423

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75175.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53	7.8e-17	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEde+l +++k G g Wk +r+ g++R++k+c++rw++yl RWR75175.1 15 RGAWSAEEDEILSNYIKTNGEGKWKDLPRRAGLRRCGKSCRLRWLNYL 62 89********************************************97 PP
2	Myb_DNA-binding	53.3	6.3e-17	68	112	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ ++eE++l+++++k+lG++ W++Ia +++ gRt++++k++w++ RWR75175.1 68 RGNISPEEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTC 112 7899****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MGRSPCCSKE GVIKRGAWSA EEDEILSNYI KTNGEGKWKD LPRRAGLRRC GKSCRLRWLN 60 YLRPDIKRGN ISPEEEDLII RLHKLLGNRW SLIAGRLPGR TDNEIKNYWN TCLGKRMKAQ 120 TSSKTGRKGE IYGSEEKKHS TETLHESHNV IRTNATRCTK VLLPPQQGEP IKEKDTDMGL 180 LEIPSVLASQ DGHYLGFLMD FDFGDLLVSD VLDSSYMQLL GDEVHEESHA NGGDCDGNSF 240 SSSFDHHLAL NEAVLGDWSE SNLIQNGVAP ELERLGLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	1e-60	MYB family protein