PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75142.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 235aa MW: 27075.4 Da PI: 9.0167

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75142.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.9	5.5e-19	6	51	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l+++v+++G+++W++Ia++++ gR++k+c++rw++ RWR75142.1 6 RGHWRPTEDEKLKELVEKYGPHNWNAIAEKLP-GRSGKSCRLRWFNQ 51 899***************************.*********996 PP
2	Myb_DNA-binding	57.6	2.9e-18	58	101	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+++T+eE+e+l+ ++ +G++ W+tIar ++ gRt++ +k++w+ RWR75142.1 58 RNPFTEEEEERLLASHRVHGNR-WATIARLFP-GRTDNAVKNHWHV 101 789*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MQMCSRGHWR PTEDEKLKEL VEKYGPHNWN AIAEKLPGRS GKSCRLRWFN QLDPRINRNP 60 FTEEEEERLL ASHRVHGNRW ATIARLFPGR TDNAVKNHWH VIRARQCRER SRYFAKKAAQ 120 TIIREGILLS ELGTSTSSSS DNLSSLVNYV RSDGDAIIHS PCQIPNNLSS KFDDYCPKVP 180 KGKDGPIKFY DFLHINTNST GGYDHRRTVE EENHKKCQSE SGIPFIDFLA VENPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	3e-74	MYB family protein