PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75107.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 419aa MW: 46481.5 Da PI: 7.6108

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75107.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.9	3.9e-32	232	285	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ RWR75107.1 232 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 285 9****************************************************7 PP
2	Myb_DNA-binding	46.6	7.9e-15	233	284	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ RWR75107.1 233 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 284 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MPFHHLFMDP SSVQTPDLSL HISPPNSAPS SLCNSNSDQE TAFDLSKSNS EGSVRPDSLA 60 CTELSLTNPT TPMEAESPWR RNKELPQQIP QNHYLLHRQT AAHPNNCRSN HLNHGVSILE 120 CDNRSIPFAG SYHLKERVPS WTFSLCSPLP SSSSPSITPA LVEGGWESSA LLHSLQGYQM 180 AGSTRFNGLS PNLVKHPNYY PHLGMGASEA FHGMIRSRLM TKFPTKRNMR APRMRWTSTL 240 HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTIKNTD KPASASEKAP 300 SDGSGEENFS PTNTTNNLNN RFTEKRGSDG SIQHGNDHLS STSLWSNSSS MGAWLQSNQS 360 DIDELRSTCI TPHQRSGHPF EESNSAQRTN SPGSHVDFRN PSLEFTLGRP DWHGKQHEG

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MPFHHLFMDP SSVQTPDLSL HISPPNSAPS SLCNSNSDQE TAFDLSKSNS EGSVRPDSLA  60
CTELSLTNPT TPMEAESPWR RNKELPQQIP QNHYLLHRQT AAHPNNCRSN HLNHGVSILE  120
CDNRSIPFAG SYHLKERVPS WTFSLCSPLP SSSSPSITPA LVEGGWESSA LLHSLQGYQM  180
AGSTRFNGLS PNLVKHPNYY PHLGMGASEA FHGMIRSRLM TKFPTKRNMR APRMRWTSTL  240
HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTIKNTD KPASASEKAP  300
SDGSGEENFS PTNTTNNLNN RFTEKRGSDG SIQHGNDHLS STSLWSNSSS MGAWLQSNQS  360
DIDELRSTCI TPHQRSGHPF EESNSAQRTN SPGSHVDFRN PSLEFTLGRP DWHGKQHEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	2e-60	G2-like family protein