PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR75003.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GeBP
Protein Properties Length: 323aa    MW: 35553.1 Da    PI: 10.5867
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR75003.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57384.71.2e-2675169297
      DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                 +f+r+wse+De+ lLqGl+d  +  g s   d++ f++ +++s+   ++ksql+eK+rrLKkKf+  +++ ++g + s  ++hd++ ++lsk++W+
  RWR75003.1  75 KFHRIWSESDELRLLQGLLDS-SADGLSFPRDLNLFFDRFSQSMPQPYTKSQLSEKLRRLKKKFRVISARLSRGLDASHLTPHDRSLLHLSKQLWH 169
                 699*****************9.667999999****************************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MSQPSPLPSS SPNHLLHQIP IKIAARKLPV KRKTPDPNPN PNPNLPIIPK SEISSPPSSS  60
DPDEEDDDLK PPPFKFHRIW SESDELRLLQ GLLDSSADGL SFPRDLNLFF DRFSQSMPQP  120
YTKSQLSEKL RRLKKKFRVI SARLSRGLDA SHLTPHDRSL LHLSKQLWHP AFAASSPFSS  180
SSSSSAKKKS TFSSSRVRVT PSPAAPTATT ASPSHTPPPP PPPPPPPPYN HDGGDLNNNG  240
EEDFQSGSSN GIGHVAAKTV MDVFDQSLSG VRMVLARHGL LRPNGGDQGK ARDLSNKWRE  300
QRVAELDVLA RRLRLVLEHA VRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.25e-16GeBP family protein