PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR74994.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WOX

Protein Properties

Length: 306aa MW: 34885.9 Da PI: 6.7987

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR74994.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.9	2.2e-20	77	136	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql +Le+l+ + +++psae+++ ++++l +++ ++V++WFqN++a+e++ RWR74994.1 77 SRWSPTPEQLLVLEDLYLRgTHTPSAEQIRNITAQLrrfgKIEGKNVFYWFQNHKARERQ 136 7***************99************************************97 PP
2	Wus_type_Homeobox	110.2	1.2e-35	75	138	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+PtpeQ+ +Le+ly +G+ tP++e+i++ita+L+++Gkie+kNVfyWFQN+kaRerqk+ RWR74994.1 75 VSSRWSPTPEQLLVLEDLYLRGTHTPSAEQIRNITAQLRRFGKIEGKNVFYWFQNHKARERQKR 138 579***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MGFSNHNDSN IADSFNSKKL RPLIPMSAIT ATNSTSTTTI SSPHSTETHG SDFFSLQDHL 60 GTPEPGKRQL NDQPVSSRWS PTPEQLLVLE DLYLRGTHTP SAEQIRNITA QLRRFGKIEG 120 KNVFYWFQNH KARERQKRRR QTEAASLMGD CNVEVLERKD SGWSARRFQV EGCKSCLSAM 180 NYNINVEEAS MYHAESRRRD EWLQQNQELQ SERLPEMHAT GHMANLSSPP HLVNTKNYSK 240 VVVSALSTQK ILINEDFNVG DDEWGRSQTL NLFPIHSDGS IFEDKMEAPV TAPMLNLSPY 300 HFFEFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	2e-36	WOX family protein