PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR74365.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Protein Properties

Length: 676aa MW: 76136.4 Da PI: 6.2134

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR74365.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	63.6	3e-20	533	630	2	96
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 +kvl++sdv+++gr+vlpkk ae+h +++ + ++ + +ed ++r+W++++++ ++ks++y+l+ ++ +Fv++ngL+egDf+v++ ++ +++++++ RWR74365.1 533 QKVLKQSDVGNLGRIVLPKKEAETHlpELEARDGIPIAMEDiGTSRVWNMRYRFwpNNKSRMYLLE-NTADFVRSNGLQEGDFIVLY--SDtKCGKYMI 628 79***********************999999999*7778***99777777777777.******************..4449998887 PP EE CS B3 95 kv 96 + RWR74365.1 629 RG 630 65 PP

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence
MNSSMQLDRD AYEREMEDEA NGRDDAILTH ERVGSDLDYT NSNIGSDMMK MMLKEREESE 60 ERRRKGMWVE DDNERSIFYG DFPSLPEIPC LSSSSTSSSS MVKYSSSSSS SSTCSASSSS 120 TSSWTVVRAE NEDGVVENHQ NREDPGIETA IAASDQPMEC MDVLEELGGM DLLDSSGIWD 180 PSSLFPCDTD DEEQQNHHHQ ELEQKNQEQD QVLSEDLAMV FFEWLKSNKE SISPEDLRSI 240 KLKRSTIECA ARRLGGGKEG MMQLLKLILA WVQNNHLQKR RKREEDMQSM TSSYPFHQQQ 300 QNPFPVQVSI SNPVFQTPNP DPNQWVSHSP FDPTFSQPPP PASPSIMGYV GDGVFSPGNN 360 HFHCSYSPPP DYQMFGSSSS WSTHLSPYNT TFPNTSSPPF LGFANKYNSG GVQVHGVGES 420 LVKMAPSATK EARKKRMARQ RRIYYHHRHQ NHHQHQHHHL SANPNCTNAT QQAEPGNWVM 480 WSSAPTPSSS SSPTLISPDA PSLRTDPMQP QQRQFSSGRQ GWKPEKNLRF LLQKVLKQSD 540 VGNLGRIVLP KKEAETHLPE LEARDGIPIA MEDIGTSRVW NMRYRFWPNN KSRMYLLENT 600 ADFVRSNGLQ EGDFIVLYSD TKCGKYMIRG VKVRKPESKQ EIRNPGKMQR NPSIASSSSN 660 ADGNSSSPSI LQTSPA

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence

MNSSMQLDRD AYEREMEDEA NGRDDAILTH ERVGSDLDYT NSNIGSDMMK MMLKEREESE  60
ERRRKGMWVE DDNERSIFYG DFPSLPEIPC LSSSSTSSSS MVKYSSSSSS SSTCSASSSS  120
TSSWTVVRAE NEDGVVENHQ NREDPGIETA IAASDQPMEC MDVLEELGGM DLLDSSGIWD  180
PSSLFPCDTD DEEQQNHHHQ ELEQKNQEQD QVLSEDLAMV FFEWLKSNKE SISPEDLRSI  240
KLKRSTIECA ARRLGGGKEG MMQLLKLILA WVQNNHLQKR RKREEDMQSM TSSYPFHQQQ  300
QNPFPVQVSI SNPVFQTPNP DPNQWVSHSP FDPTFSQPPP PASPSIMGYV GDGVFSPGNN  360
HFHCSYSPPP DYQMFGSSSS WSTHLSPYNT TFPNTSSPPF LGFANKYNSG GVQVHGVGES  420
LVKMAPSATK EARKKRMARQ RRIYYHHRHQ NHHQHQHHHL SANPNCTNAT QQAEPGNWVM  480
WSSAPTPSSS SSPTLISPDA PSLRTDPMQP QQRQFSSGRQ GWKPEKNLRF LLQKVLKQSD  540
VGNLGRIVLP KKEAETHLPE LEARDGIPIA MEDIGTSRVW NMRYRFWPNN KSRMYLLENT  600
ADFVRSNGLQ EGDFIVLYSD TKCGKYMIRG VKVRKPESKQ EIRNPGKMQR NPSIASSSSN  660
ADGNSSSPSI LQTSPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	2e-72	B3 family protein