PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR74202.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family B3
Protein Properties Length: 307aa    MW: 35244.1 Da    PI: 9.845
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR74202.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.64.7e-1865154199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ffkv+     ++++ l++p  f+ ++ gk     + tl+ ++ ++W vk+  +   g+ ++ +GW +Fvk++ L++gDf+vF++dg+s+f   v++f k
  RWR74202.1  65 FFKVM--IGDFSEK-LRIPPAFIPKFHGK--LIEESTLKCPNDEVWPVKM--KHDAGSLFFDNGWHDFVKDKSLEVGDFLVFRYDGDSGF--DVQIFGK 154
                 67777..6666665.9*******999554..22367999***********..999999****************************9999..9999976 PP
2B339.78.7e-132283041698
                 EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 + +pk f++++++   ++++ +++++sg+ W vk+    + +r  +++GW++F   n+L  gD ++F++ +++     v+++r
  RWR74202.1 228 VLIPKAFVRQYNLT--KKVDWSFRNPSGELWPVKI--VHSCNRSDFGAGWRDFRVGNKLTGGDNCIFEFLKDDII--QVHIIR 304
                 68*********988..6789***************..777777779**********************8764433..666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MPLNRNVSLR VGLLPLYLYC SLPGALSVAF ILLLFSFLVS YLSLSLCNLQ MGSSREPVFI  60
ETPCFFKVMI GDFSEKLRIP PAFIPKFHGK LIEESTLKCP NDEVWPVKMK HDAGSLFFDN  120
GWHDFVKDKS LEVGDFLVFR YDGDSGFDVQ IFGKSGCEKG GSLFYKKVRK CLRFTALCTC  180
RFQIKSTESA EKNGKGKRKA VFDVKSCHFK LKHPHFTARW RQHKPYTVLI PKAFVRQYNL  240
TKKVDWSFRN PSGELWPVKI VHSCNRSDFG AGWRDFRVGN KLTGGDNCIF EFLKDDIIQV  300
HIIRAKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.17e-18B3 family protein