PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR73690.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

LBD

Protein Properties

Length: 291aa MW: 32824.3 Da PI: 6.9135

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR73690.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	124.9	3.9e-39	10	109	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 aCaaC+++rrkC++dC+lapyfpae++k+f+n+h+lFG+sn+lk+lk+l++e++ +am+s+vy+A++r r Pv+G+ gvi +lq l+++++ l+++++ RWR73690.1 10 ACAACRYQRRKCNTDCPLAPYFPAEKTKQFQNAHRLFGVSNILKILKQLNTEQKMEAMRSIVYQANMRERYPVHGCQGVIYRLQLALHEHQQALDAVNA 108 7*********************************************************************************************99988 PP DUF260 100 e 100 + RWR73690.1 109 Q 109 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MTVKGGTSQA CAACRYQRRK CNTDCPLAPY FPAEKTKQFQ NAHRLFGVSN ILKILKQLNT 60 EQKMEAMRSI VYQANMRERY PVHGCQGVIY RLQLALHEHQ QALDAVNAQL AICRQHQLQI 120 SSPPPISPSS QLQLAPATTP PANYALSLFH NHHHHQQFNE MDTGNTQHLF PNVITADSSS 180 NSNFNNDNTN NNDNVSQLWS HYSYQHSYYN NSPNVQSQFM VAQPVATNGY DEMSNFLDNI 240 DDRQSYVDSK GAYDSSPESS LKDTTQSMEM KHDHVGEDKL NITATCPSSI N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	2e-42	LBD family protein