PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR72947.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 279aa MW: 31494.2 Da PI: 8.9363

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR72947.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.4	5.3e-32	152	209	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+ver+++dp++v++tYeg+H h+ RWR72947.1 152 EDGYRWRKYGQKGVKNSPFPRSYYRCTNSKCMVKKRVERCSKDPSIVITTYEGQHCHH 209 8******************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MMEEEEMKIR FKTEISGDGK APAGNPTTRT YSLTDRESTI LSEFGWNLPP EIDDRNHTAA 60 RGLEPFALEE ASDSTRRLLL RQDRPPSGSP VAPSPENQSI SSNSSEEPPA GQPESEGRSA 120 AETSNKAKKK KQKQCRQPRI AFMTKSEVEN LEDGYRWRKY GQKGVKNSPF PRSYYRCTNS 180 KCMVKKRVER CSKDPSIVIT TYEGQHCHHS LPSSRGFART HEAASSAQPF YFSNLQFQLH 240 RPLSQPGHWP PLPPHFSVPP APTDEGLLDD IVQPRMQNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	1e-49	WRKY family protein