PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR72934.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB
Protein Properties Length: 322aa    MW: 36786.2 Da    PI: 10.5841
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR72934.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.82.6e-181863147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ede+l ++v+q+G+ +W++Ia+++  gR++k+c++rw++ 
       RWR72934.1 18 RGHWRPAEDEKLRQLVEQHGPQNWNSIAEKLK-GRSGKSCRLRWFNQ 63
                     899****************************9.***********996 PP
2Myb_DNA-binding57.62.8e-1870113146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r ++T+eE+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+ 
       RWR72934.1  70 RRPFTQEEEERLLAAHRVHGSK-WALIARLFP-GRTDNAVKNHWHV 113
                      679*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MIMEESKSST DETKTCPRGH WRPAEDEKLR QLVEQHGPQN WNSIAEKLKG RSGKSCRLRW  60
FNQLDPRINR RPFTQEEEER LLAAHRVHGS KWALIARLFP GRTDNAVKNH WHVIMARRHR  120
ERSKLFGKRS SQHHLDTTIN GFFSRSSAHQ DKNVLKQLQF GTSKIFEFQS HAKDGVFSIS  180
PASSLSSWAF GGSISSTKTQ SWDVFSGGRA ERFTPKSNYC VLESSHSFNQ SLRRRYYNSS  240
MYGGFRNLGA QGLTIYNRGV SNPVDFSNIS DGCDNETMFK VRLGENSATF LKTRANNQKQ  300
FGDETLKQKD APFIDFLGVG LS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.17e-68MYB family protein