PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR72547.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | CPP | ||||||||
Protein Properties | Length: 164aa MW: 18597.2 Da PI: 8.4282 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 39.9 | 8.4e-13 | 80 | 118 | 3 | 41 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 + +C Ck+skCl +YC Cf +gk+C+e C C+dC+N ++ RWR72547.1 80 CTRCLCKNSKCLMLYCACFVSGKYCAEGCGCQDCHNISN 118 679*********************************876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 164 aa Download sequence |
MDDSENEELM QQMAMQMFLR RWNRTGNGDG GESLMRRVVP LTTSPRLIVS QAMSTRSSSI 60 PIRDVRSWER NPNTFKNEGC TRCLCKNSKC LMLYCACFVS GKYCAEGCGC QDCHNISNNE 120 EMIHGIRQQI ESRNPHAFRR KVVKHATESS QSSGQLAPIP PNIH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G22780.1 | 4e-22 | CPP family protein |