PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR72545.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | CPP | ||||||||
Protein Properties | Length: 177aa MW: 20116.7 Da PI: 7.6006 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 40.8 | 4.4e-13 | 79 | 118 | 3 | 42 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 + +C Ck+skCl +YC Cf +g++C+e C C+dC+Nk+++ RWR72545.1 79 CTRCLCKNSKCLMLYCACFVSGEYCAEGCGCQDCHNKSDN 118 679*********************************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MDDSENEELM QQMALQMFLR RWNRTGNGDG GESLMRRVVP LTSPRLIVSQ AMSTRSSSIP 60 IRDVRSWERD PNTFKNEGCT RCLCKNSKCL MLYCACFVSG EYCAEGCGCQ DCHNKSDNEE 120 MIHGIRQQIE SRDPHAFRRK VVKQATESSQ SSGSGELKEK LKDIDTNQEK GGSFYIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22780.1 | 3e-22 | CPP family protein |