PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR72492.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GATA
Protein Properties Length: 341aa    MW: 37611.6 Da    PI: 5.5992
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR72492.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.31.8e-17237271135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C t kTp+WR gp g+ktLCnaCG+++++ +l
  RWR72492.1 237 CLHCATEKTPQWRTGPMGPKTLCNACGVRFKSGRL 271
                 99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MEAPEFFHGG FCRAGNPQFT PEKRYSEQKP AEHFLIEDLL DFSNEDDVAP ADEVFDSGTG  60
NSTDSSTVTV VDSCNSSFSG SEPHFSGDIS QRSFTDSHFS GDLCVPYDDV AELEWLSNFV  120
EESFSSEDLQ KLQLISGLKV QTEEEISEAQ EFPDKNARND TIFRSDVSVP GKARSKRSRA  180
APCNWSSRLL VLSPTTSSSE SGTSGVISGK KMTKSTPKKK EAADAGGGSS GGDGRKCLHC  240
ATEKTPQWRT GPMGPKTLCN ACGVRFKSGR LVPEYRPAAS PTFMLTKHSN SHRKVLELRR  300
QKEMQMQQHQ QQQFLHPNPV FDITDEFLIH QHGGSDFGQL I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.13e-65GATA family protein